Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gldACOG0371 [C] Glycerol dehydrogenase and related enzymes. (363 aa)    
Predicted Functional Partners:
dAK
COG2376 [G] Dihydroxyacetone kinase.
  
 
 0.665
dAK-2
COG2376 [G] Dihydroxyacetone kinase.
  
 
 0.597
dAK-3
COG2376 [G] Dihydroxyacetone kinase.
  
 
 0.597
metC
COG0626 [E] Cystathionine beta-lyases/cystathionine gamma-synthases.
  
    0.546
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
      
 0.528
msrB
COG0229 [O] Conserved domain frequently associated with peptide methionine sulfoxide reductase.
       0.522
alsD
COG3527 [Q] Alpha-acetolactate decarboxylase.
      
 0.459
cysK
COG0031 [E] Cysteine synthase.
       0.450
pykF
COG0469 [G] Pyruvate kinase; Belongs to the pyruvate kinase family.
      
 0.423
scrA
PTS system, sucrose-specific IIABC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
  
 0.416
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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