| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSL_0053 | rplC | LSL_0053 | LSL_1435 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.715 |
| LSL_0053 | rplD | LSL_0053 | LSL_1434 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | LSU ribosomal protein L1E; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.735 |
| LSL_0053 | rplR | LSL_0053 | LSL_1419 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.715 |
| LSL_0053 | rplU | LSL_0053 | LSL_0956 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.739 |
| LSL_0053 | rplW | LSL_0053 | LSL_1433 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.715 |
| LSL_0053 | rpmD | LSL_0053 | LSL_1417 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | COG1841 [J] Ribosomal protein L30/L7E. | 0.728 |
| LSL_0053 | rpmH | LSL_0053 | LSL_1738 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | COG0230 [J] Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.721 |
| LSL_0053 | rpsC | LSL_0053 | LSL_1429 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.737 |
| LSL_0053 | rpsO | LSL_0053 | LSL_0638 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.732 |
| LSL_0053 | rpsS | LSL_0053 | LSL_1431 | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.715 |
| rplC | LSL_0053 | LSL_1435 | LSL_0053 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains. | 0.715 |
| rplC | rplD | LSL_1435 | LSL_1434 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L1E; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
| rplC | rplR | LSL_1435 | LSL_1419 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
| rplC | rplU | LSL_1435 | LSL_0956 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
| rplC | rplW | LSL_1435 | LSL_1433 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| rplC | rpmD | LSL_1435 | LSL_1417 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | COG1841 [J] Ribosomal protein L30/L7E. | 0.997 |
| rplC | rpmH | LSL_1435 | LSL_1738 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | COG0230 [J] Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.968 |
| rplC | rpsC | LSL_1435 | LSL_1429 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| rplC | rpsO | LSL_1435 | LSL_0638 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.988 |
| rplC | rpsS | LSL_1435 | LSL_1431 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
