STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scrBSucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (496 aa)    
Predicted Functional Partners:
scrA
PTS system, sucrose-specific IIABC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
 0.998
galA
COG3345 [G] Alpha-galactosidase.
 
  
 0.979
scrR
Sucrose operon repressor; COG1522 [K] Transcriptional regulators.
 
  
 0.974
treB
PTS system, trehalose-specific IIBC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
 0.969
LSL_1461
Fructokinase; COG1940 [KG] Transcriptional regulator/sugar kinase.
  
 
 0.955
LSL_1712
Oligo-1,6-glucosidase; COG0366 [G] Glycosidases.
  
 
 0.937
LSL_1711
Transcriptional regulator, LacI family; COG1522 [K] Transcriptional regulators.
 
  
 0.878
fruA
COG1299 [G] Phosphotransferase system, fructose-specific IIC component.
  
 
 0.816
LSL_0552
Glucokinase; COG1940 [KG] Transcriptional regulator/sugar kinase.
  
 
 0.723
ccpA
Catabolite control protein A; COG1522 [K] Transcriptional regulators.
  
  
 0.718
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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