Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
scrBSucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (496 aa)    
Predicted Functional Partners:
scrA
PTS system, sucrose-specific IIABC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
 0.998
treB
PTS system, trehalose-specific IIBC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
 0.969
LSL_1461
Fructokinase; COG1940 [KG] Transcriptional regulator/sugar kinase.
  
 
 0.964
scrR
Sucrose operon repressor; COG1522 [K] Transcriptional regulators.
 
  
 0.942
galA
COG3345 [G] Alpha-galactosidase.
 
  
 0.938
LSL_1712
Oligo-1,6-glucosidase; COG0366 [G] Glycosidases.
  
 
 0.928
fruA
COG1299 [G] Phosphotransferase system, fructose-specific IIC component.
   
 
 0.831
manX
PTS system, mannose-specific IIAB component; COG2893 [G] Phosphotransferase system, mannose/fructose-specific component IIA.
   
 
 0.707
manX-2
PTS system, mannose-specific IIAB component; COG2893 [G] Phosphotransferase system, mannose/fructose-specific component IIA.
   
 
 0.707
LSL_1714
PTS system, mannose-specific IID component; COG3716 [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID.
  
 
 0.697
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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