STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0077Conserved hypothetical protein. (233 aa)    
Predicted Functional Partners:
LSL_0078
Multidrug resistance protein B; COG0477 [GEPR] Permeases of the major facilitator superfamily.
 
    0.932
LSL_0079
Transcriptional regulator, MerR family; COG0583 [K] Transcriptional regulator.
 
    0.863
LSL_0225
IpaB/EvcA family protein.
  
     0.644
LSL_1643
COG3613 [F] Nucleoside 2-deoxyribosyltransferase.
  
     0.592
gloA
Glyoxalase family protein; COG0346 [E] Lactoylglutathione lyase and related lyases.
       0.521
LSL_1730
Conserved hypothetical protein; Belongs to the HesB/IscA family.
  
     0.418
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.