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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0089COG0718 [S] Uncharacterized protein conserved in bacteria. (129 aa)    
Predicted Functional Partners:
manX
PTS system, mannose-specific IIAB component; COG2893 [G] Phosphotransferase system, mannose/fructose-specific component IIA.
 
  
 0.959
LSL_0088
PTS system, mannose-specific IID component; COG3716 [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID.
 
  
 0.912
manX-2
PTS system, mannose-specific IIAB component; COG2893 [G] Phosphotransferase system, mannose/fructose-specific component IIA.
 
  
 0.907
LSL_0087
PTS system, mannose-specific IIC component; COG3715 [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 
  
 0.904
LSL_0655
PTS system, mannose-specific IIC component; COG3715 [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 
  
 0.790
LSL_0656
PTS system, mannose-specific IID component; COG3716 [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID.
 
  
 0.733
LSL_0082
Putative sugar-binding protein; COG1653 [G] ABC-type sugar transport system, periplasmic component.
 
     0.423
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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