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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpmBPhosphoglycerate mutase; COG0406 [G] Fructose-2,6-bisphosphatase; Belongs to the phosphoglycerate mutase family. (223 aa)    
Predicted Functional Partners:
LSL_0126
CAAX amino terminal protease family; COG1266 [R] Predicted metal-dependent membrane protease.
  
    0.620
pgk
COG0126 [G] 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.546
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 0.544
napA
Na+/H+ antiporter; COG0475 [P] Kef-type K+ transport systems, membrane components.
  
    0.437
fldA
Flavodoxin; COG0716 [C] Flavodoxins.
       0.426
LSL_0128
COG1791 [S] Uncharacterized conserved protein, contains double-stranded beta-helix domain.
       0.409
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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