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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0141ABC transporter substrate-binding protein; COG1464 [P] ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family. (271 aa)    
Predicted Functional Partners:
LSL_0140
COG2011 [P] ABC-type metal ion transport system, permease component.
 0.999
LSL_0132
COG2011 [P] ABC-type metal ion transport system, permease component.
 0.997
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.990
LSL_0130
ABC transporter substrate-binding protein; COG1464 [P] ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.
  
  
 
0.916
LSL_1061
Polar amino acid ABC transporter, substrate binding protein; COG0834 [ET] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
  
 0.432
pstS
Phosphate-binding protein; COG0226 [P] ABC-type phosphate transport system, periplasmic component.
      
 0.408
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.