STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0298Hypothetical protein, phage associated. (448 aa)    
Predicted Functional Partners:
LSL_0295
Hypothetical protein, phage associated.
  
    0.722
LSL_0296
Phage lysin; COG3757 [M] Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
       0.544
LSL_0297
Hypothetical protein, phage associated.
       0.515
LSL_0294
COG5283 [S] Phage-related tail protein.
       0.510
LSL_0299
Hypothetical protein, phage associated.
       0.467
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.462
LSL_0300
Hypothetical protein, phage associated.
       0.439
LSL_0301
Hypothetical protein, phage associated.
       0.439
LSL_0304
Phage lysin; COG1388 [M] FOG: LysM repeat.
  
    0.407
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.