STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
argGCOG0137 [E] Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (403 aa)    
Predicted Functional Partners:
argH
COG0165 [E] Argininosuccinate lyase.
 
 0.999
carB
COG0458 [EF] Carbamoylphosphate synthase large subunit (split gene in MJ).
 
 
 0.989
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.926
asnB
COG0367 [E] Asparagine synthase (glutamine-hydrolyzing).
   
 0.917
asnA
Aspartate--ammonia ligase; COG2502 [E] Asparagine synthetase A.
   
 
 0.917
pyrB
COG0540 [F] Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.913
ansB
COG0252 [EJ] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
   
 
 0.905
racX
COG1794 [M] Aspartate racemase.
     
  0.900
carA
COG0505 [EF] Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
  
 
 0.895
carA-2
COG0505 [EF] Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
  
 
 0.895
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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