Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LSL_0324Metallo-beta-lactamase family protein; COG2220 [R] Predicted Zn-dependent hydrolases of the beta-lactamase fold; Belongs to the UPF0173 family. (219 aa)    
Predicted Functional Partners:
LSL_0323
ABC transporter, ATP-binding protein; COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains.
       0.565
LSL_1628
COG3711 [K] Transcriptional antiterminator.
     
 0.442
LSL_1113
Phosphoesterase, DHH family protein; COG0618 [R] Exopolyphosphatase-related proteins.
 
   
 0.424
udp
Phosphorylase, Pnp/Udp family; COG2820 [F] Uridine phosphorylase.
       0.423
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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