STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0334Hypothetical secreted protein. (364 aa)    
Predicted Functional Partners:
LSL_0335
Hypothetical secreted protein.
 
    
0.754
mbp3
Mucus binding protein.
  
     0.701
LSL_0844
Hypothetical secreted protein; COG1196 [D] Chromosome segregation ATPases.
  
     0.617
LSL_0328
Hypothetical protein.
       0.605
spoVK
COG0464 [O] ATPases of the AAA+ class.
       0.605
LSL_0330
Hypothetical protein.
       0.605
LSL_0331
Hypothetical protein.
       0.605
LSL_0332
Conserved hypothetical protein.
       0.605
LSL_0333
Hypothetical protein.
       0.605
LSL_0906
Hypothetical membrane spanning protein.
  
     0.559
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.