STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0385Conserved hypothetical protein. (91 aa)    
Predicted Functional Partners:
LSL_0820
Conserved hypothetical protein.
  
     0.699
LSL_0610
Hypothetical protein.
  
     0.674
LSL_0384
Conserved hypothetical protein.
       0.622
LSL_1000
Hypothetical membrane spanning protein.
  
     0.570
clpE
ATP-dependent clp protease ATP-binding subunit; COG0542 [O] ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
       0.537
LSL_0387
Hypothetical protein.
 
     0.526
LSL_1007
Conserved hypothetical protein.
  
     0.480
LSL_1278
COG0531 [E] Amino acid transporters.
  
     0.452
LSL_1456
Conserved hypothetical protein.
  
     0.410
LSL_0861
Conserved hypothetical protein.
  
     0.408
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.