Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LSL_0545Hypothetical membrane spanning protein. (607 aa)    
Predicted Functional Partners:
LSL_0546
Transposase ISLasa5a, IS3 family; COG0675 [L] Transposase and inactivated derivatives.
       0.584
LSL_0544
Hypothetical protein; COG1694 [R] Predicted pyrophosphatase.
       0.532
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.524
LSL_1001
Conserved hypothetical protein; COG1073 [R] Hydrolases of the alpha/beta superfamily.
 
     0.498
LSL_0547
Hypothetical protein; COG0419 [L] ATPase involved in DNA repair.
 
     0.483
LSL_0448
Hypothetical protein.
  
     0.481
LSL_0480
Phosphotransferase enzyme family; COG0510 [M] Predicted choline kinase involved in LPS biosynthesis.
  
     0.475
phoU
Phosphate transport system protein; Plays a role in the regulation of phosphate uptake.
   
    0.400
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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