STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0552Glucokinase; COG1940 [KG] Transcriptional regulator/sugar kinase. (320 aa)    
Predicted Functional Partners:
scrA
PTS system, sucrose-specific IIABC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
 
 0.999
treB
PTS system, trehalose-specific IIBC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
 
 0.999
pgi
COG0166 [G] Glucose-6-phosphate isomerase.
 
 
 0.966
glmM-2
Phosphoglucomutase; COG1109 [G] Phosphomannomutase.
  
 
 0.941
galM
Aldose 1-epimerase; COG2017 [G] Galactose mutarotase and related enzymes.
 
 
 0.924
galM-2
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
 
 
 0.924
lacZ
COG3250 [G] Beta-galactosidase/beta-glucuronidase.
    
 0.913
manA
COG1482 [G] Phosphomannose isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
 
  
 0.909
fba
COG0191 [G] Fructose/tagatose bisphosphate aldolase.
    
 0.905
LSL_0551
COG0718 [S] Uncharacterized protein conserved in bacteria.
  
    0.878
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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