STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0675Hypothetical protein. (69 aa)    
Predicted Functional Partners:
LSL_0610
Hypothetical protein.
  
     0.591
LSL_0676
COG1011 [R] Predicted hydrolase (HAD superfamily).
       0.580
LSL_0674
Transcriptional regulators, LysR family; COG0583 [K] Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.571
LSL_0448
Hypothetical protein.
  
     0.538
LSL_1288
Conserved hypothetical protein.
  
    0.530
LSL_0393
COG0718 [S] Uncharacterized protein conserved in bacteria.
  
     0.517
LSL_0641
Hypothetical protein.
  
     0.507
LSL_0528
Conserved hypothetical protein.
  
     0.456
LSL_1089
COG0344 [S] Predicted membrane protein.
  
     0.437
LSL_1357
Cell division protein DIVIC; COG2919 [D] Septum formation initiator.
  
     0.410
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.