Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LSL_0694Galactofuranosyltransferase. (335 aa)    
Predicted Functional Partners:
rfaG-5
Glycosyltransferase; COG3774 [M] Mannosyltransferase OCH1 and related enzymes.
    0.911
rfaG-6
COG0463 [M] Glycosyltransferases involved in cell wall biogenesis.
 
    0.841
LSL_1547
Oligosaccharide translocase; COG2244 [R] Membrane protein involved in the export of O-antigen and teichoic acid; flippase.
 
    0.765
LSL_1525
Hypothetical membrane spanning protein.
 
     0.751
LSL_0166
Hypothetical membrane spanning protein.
 
     0.743
LSL_0697
Hypothetical secreted protein.
       0.732
LSL_0698
Hypothetical membrane spanning protein.
       0.732
LSL_0610
Hypothetical protein.
  
     0.716
glf
COG0562 [M] UDP-galactopyranose mutase.
 
    0.627
LSL_1000
Hypothetical membrane spanning protein.
  
     0.591
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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