STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0795Hypothetical protein, phage associated. (271 aa)    
Predicted Functional Partners:
LSL_0796
Hypothetical protein, phage associated.
 
    0.964
LSL_0797
Phage lysin; COG3757 [M] Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
   0.915
LSL_0294
COG5283 [S] Phage-related tail protein.
 
    0.899
LSL_0794
COG5283 [S] Phage-related tail protein.
 
     0.870
LSL_0296
Phage lysin; COG3757 [M] Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
    0.843
LSL_0799
Phage minor head protein.
  
   0.804
LSL_0281
Terminase large subunit; COG4626 [R] Phage terminase-like protein, large subunit.
 
     0.786
LSL_0283
Portal protein; COG4672 [S] Phage-related protein.
 
    0.782
LSL_0288
Phage head-tail joining protein.
 
     0.782
LSL_0289
Phage tail protein.
 
     0.778
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.