Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
LSL_0844Hypothetical secreted protein; COG1196 [D] Chromosome segregation ATPases. (429 aa)    
Predicted Functional Partners:
LSL_1085
Hypothetical surface protein; COG3468 [MU] Type V secretory pathway, adhesin AidA.
  
     0.771
LSL_0334
Hypothetical secreted protein.
  
     0.617
LSL_1463
COG0346 [E] Lactoylglutathione lyase and related lyases.
  
     0.597
LSL_1539
GDSL-like Lipase/Acylhydrolase; COG2755 [E] Lysophospholipase L1 and related esterases.
  
     0.536
LSL_0843
Hypothetical secreted protein.
       0.517
fhs
Formate--tetrahydrofolate ligase; COG2759 [F] Formyltetrahydrofolate synthetase; Belongs to the formate--tetrahydrofolate ligase family.
       0.484
LSL_0845
Hypothetical protein.
       0.413
LSL_0335
Hypothetical secreted protein.
  
     0.412
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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