STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntHManganese transport protein; COG1914 [P] Mn2+ and Fe2+ transporters of the NRAMP family. (521 aa)    
Predicted Functional Partners:
eriC
COG0038 [P] Chloride channel protein EriC.
     
 0.813
LSL_1586
ABC transporter, ATP-binding protein; COG1121 [P] ABC-type Mn/Zn transport systems, ATPase component.
  
  
 0.620
LSL_1585
COG1108 [P] ABC-type Mn2+/Zn2+ transport systems, permease components.
  
  
 0.582
LSL_1317
COG0589 [T] Universal stress protein UspA and related nucleotide-binding proteins.
  
  
 0.546
recQ
COG0514 [L] Superfamily II DNA helicase.
       0.507
LSL_0903
COG0718 [S] Uncharacterized protein conserved in bacteria.
       0.507
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.507
troR
Iron-dependent repressor; COG1321 [K] Mn-dependent transcriptional regulator.
 
  
 0.496
fruA
COG1299 [G] Phosphotransferase system, fructose-specific IIC component.
       0.428
LSL_1587
ABC transporter substrate binding protein; COG0803 [P] ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.427
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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