Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hsdSType I restriction-modification system specificity subunit; COG0732 [V] Restriction endonuclease S subunits. (401 aa)    
Predicted Functional Partners:
hsdM
COG0286 [V] Type I restriction-modification system methyltransferase subunit.
 
   
 0.832
hsdR
Type I restriction-modification system restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.819
xerC-4
DNA integration/recombination/inversion protein; COG0582 [L] Integrase; Belongs to the 'phage' integrase family.
     0.657
hsdS-2
Type I restriction-modification system specificity subunit; COG0732 [V] Restriction endonuclease S subunits.
 
   
0.608
LSL_0913
Putative acyltransferases and hydrolases with the alpha/beta hydrolase fold; COG4814 [R] Uncharacterized protein with an alpha/beta hydrolase fold.
       0.446
celB
Cellobiose PTS, EIIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.446
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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