Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xerC-4DNA integration/recombination/inversion protein; COG0582 [L] Integrase; Belongs to the 'phage' integrase family. (305 aa)    
Predicted Functional Partners:
hsdS-3
Type I restriction-modification system specificity subunit; COG0732 [V] Restriction endonuclease S subunits.
 
     0.881
hsdR
Type I restriction-modification system restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.780
hsdM
COG0286 [V] Type I restriction-modification system methyltransferase subunit.
 
   
 0.746
hsdS-2
Type I restriction-modification system specificity subunit; COG0732 [V] Restriction endonuclease S subunits.
     0.736
hsdS
Type I restriction-modification system specificity subunit; COG0732 [V] Restriction endonuclease S subunits.
     0.657
comFC
ComF operon protein 3; COG1040 [R] Predicted amidophosphoribosyltransferases.
   
    0.441
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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