Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
qorCOG0604 [CR] NADPH:quinone reductase and related Zn-dependent oxidoreductases. (334 aa)    
Predicted Functional Partners:
menE
O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
  
 
 0.706
LSL_0616
Protein phosphatase 2C; COG0631 [T] Serine/threonine protein phosphatase.
  
   0.648
LSL_0972
COG1395 [K] Predicted transcriptional regulator.
 
   
 0.605
ppiB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.570
LSL_1397
Dehydrogenase; COG1028 [IQR] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
 0.550
LSL_1298
Succinate-semialdehyde dehydrogenase (NADP+); COG1012 [C] NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
 
 0.542
LSL_0973
Conserved hypothetical protein; COG0702 [MG] Predicted nucleoside-diphosphate-sugar epimerases.
  
 
 0.525
spoVK
COG0464 [O] ATPases of the AAA+ class.
   
   0.468
glmM-2
Phosphoglucomutase; COG1109 [G] Phosphomannomutase.
 
 
    0.450
maoC
Dehydrogenase with MaoC-like domain; COG2030 [I] Acyl dehydratase.
 
 
 0.446
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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