STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_0993UDP-galactose phosphate transferase; COG2148 [M] Sugar transferases involved in lipopolysaccharide synthesis. (215 aa)    
Predicted Functional Partners:
wecD-3
COG0110 [R] Acetyltransferase (isoleucine patch superfamily).
    0.988
rfaG-17
COG0438 [M] Glycosyltransferase.
 
  
 0.978
LSL_0994
Aminotransferase; COG0399 [M] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.949
LSL_0995
UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase; COG1086 [MG] Predicted nucleoside-diphosphate sugar epimerases.
  
 0.939
LSL_1262
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
    
 0.884
rfaG-16
COG0438 [M] Glycosyltransferase.
 
  
 0.815
LSL_0996
Tyrosine-protein kinase; COG0455 [D] ATPases involved in chromosome partitioning; capsular polysaccharide biosynthesis.
  
  
 0.774
LSL_0997
Chain length regulator; COG3944 [M] Capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis.
  
  
 0.757
rfaG-15
COG0438 [M] Glycosyltransferase.
 
  
 0.738
rfaG-13
Glycosyltransferase; COG1216 [R] Predicted glycosyltransferases.
  
  
 0.733
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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