STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wecD-6Acetyltransferase, GNAT family; COG0454 [KR] Histone acetyltransferase HPA2 and related acetyltransferases. (146 aa)    
Predicted Functional Partners:
ada
COG0350 [L] Methylated DNA-protein cysteine methyltransferase.
      0.902
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
      0.769
mutT
7,8-dihydro-8-oxoguanine-triphosphatase; COG0494 [LR] NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
    0.720
ssl
DNA/RNA helicase, DEAD/DEAH box family; COG1061 [KL] DNA or RNA helicases of superfamily II.
       0.718
LSL_1009
Hypothetical membrane spanning protein.
       0.581
galA
COG3345 [G] Alpha-galactosidase.
       0.581
LSL_1011
Hypothetical protein.
       0.581
wecD-12
Acetyltransferase; COG0454 [KR] Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.572
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.