STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSL_1194Hypothetical protein. (112 aa)    
Predicted Functional Partners:
LSL_1195
Hypothetical protein, phage associated.
       0.737
LSL_1196
Hypothetical protein, phage associated.
       0.737
LSL_1197
Hypothetical protein, phage associated.
       0.737
LSL_1193
Phage immunity repressor.
       0.631
LSL_1192
Phage repressor proteins.
       0.581
LSL_1198
Hypothetical protein, phage associated.
       0.455
LSL_1190
Hypothetical protein, phage associated.
       0.410
LSL_1191
Phage transcriptional regulator, Cro/CI family; COG0640 [K] Predicted transcriptional regulators.
       0.410
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.