Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LSL_1504FMN reductase; COG0431 [R] Predicted flavoprotein. (187 aa)    
Predicted Functional Partners:
LSL_1505
Luciferase-like monooxygenase; COG2141 [C] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
 0.969
ribF
Riboflavin kinase / FMN adenylyltransferase; COG0196 [H] FAD synthase; Belongs to the ribF family.
    
  0.904
LSL_1506
Transcriptional regulator, MarR family; COG0640 [K] Predicted transcriptional regulators.
       0.542
galM-2
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
       0.492
mbp2
Mucus binding protein; COG3652 [S] Predicted outer membrane protein.
  
   
 0.488
LSL_0725
Hypothetical ABC transporter permease protein; COG3559 [M] Putative exporter of polyketide antibiotics.
  
     0.446
LSL_0045
Hypothetical protein; COG1522 [K] Transcriptional regulators.
 
     0.425
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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