Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LSL_1522Hypothetical exported protein; COG5263 [R] FOG: Glucan-binding domain (YG repeat). (812 aa)    
Predicted Functional Partners:
LSL_1493
Hypothetical membrane spanning protein.
  
   
 0.603
LSL_1567
Hypothetical membrane spanning protein.
  
   
 0.545
LSL_1007
Conserved hypothetical protein.
  
     0.520
LSL_0384
Conserved hypothetical protein.
  
     0.480
thrC
COG0498 [E] Threonine synthase.
       0.479
LSL_1315
Transcriptional regulator, MarR family; COG0583 [K] Transcriptional regulator.
  
     0.477
mbp2
Mucus binding protein; COG3652 [S] Predicted outer membrane protein.
  
     0.475
LSL_1593
COG4858 [S] Uncharacterized membrane-bound protein conserved in bacteria.
  
     0.472
LSL_0547
Hypothetical protein; COG0419 [L] ATPase involved in DNA repair.
 
     0.464
LSL_1000
Hypothetical membrane spanning protein.
  
     0.412
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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