Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LSL_1567Hypothetical membrane spanning protein. (278 aa)    
Predicted Functional Partners:
LSL_1566
Conserved hypothetical protein; COG0344 [S] Predicted membrane protein.
 
    0.938
LSL_1568
Beta-N-acetylhexosaminidase; COG1472 [G] Beta-glucosidase-related glycosidases.
 
   
 0.825
LSL_1522
Hypothetical exported protein; COG5263 [R] FOG: Glucan-binding domain (YG repeat).
  
   
 0.545
LSL_1516
N-acetylmuramoyl-L-alanine amidase; COG5263 [R] FOG: Glucan-binding domain (YG repeat).
  
     0.464
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.425
LSL_1564
DNA helicase; COG0210 [L] Superfamily I DNA and RNA helicases.
       0.416
LSL_1565
Conserved hypothetical protein; COG3593 [L] Predicted ATP-dependent endonuclease of the OLD family.
       0.413
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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