STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
terCTellurium resistance protein; COG0861 [P] Membrane protein TerC, possibly involved in tellurium resistance. (241 aa)    
Predicted Functional Partners:
LSL_1622
Transcriptional regulator, Cro/CI family; COG0583 [K] Transcriptional regulator.
       0.541
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.517
trxA-3
Thioredoxin; COG0526 [OC] Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
       0.493
mtlA
COG2213 [G] Phosphotransferase system, mannitol-specific IIBC component.
       0.418
mtlD
COG0246 [G] Mannitol-1-phosphate/altronate dehydrogenases.
       0.406
LSL_1619
PTS system, mannitol-specific IIA component; COG4668 [G] Mannitol/fructose-specific phosphotransferase system, IIA domain.
       0.406
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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