STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpF-3COG0580 [G] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. (235 aa)    
Predicted Functional Partners:
LSL_1631
COG0718 [S] Uncharacterized protein conserved in bacteria.
  
  
 0.826
dAK
COG2376 [G] Dihydroxyacetone kinase.
  
  
 0.805
dAK-2
COG2376 [G] Dihydroxyacetone kinase.
  
  
 0.768
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 
 0.701
dAK-3
COG2376 [G] Dihydroxyacetone kinase.
  
  
 0.614
glpO
Alpha-glycerophosphate oxidase; COG0240 [C] Glycerol-3-phosphate dehydrogenase.
 
  
 0.611
fruA
COG1299 [G] Phosphotransferase system, fructose-specific IIC component.
   
  
 0.553
scrA
PTS system, sucrose-specific IIABC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
   
  
 0.527
treB
PTS system, trehalose-specific IIBC component; COG1263 [G] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
   
  
 0.527
LSL_0616
Protein phosphatase 2C; COG0631 [T] Serine/threonine protein phosphatase.
    
   0.499
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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