Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
LSL_1708Transcriptional regulator, ArsR family; COG0583 [K] Transcriptional regulator. (119 aa)    
Predicted Functional Partners:
LSL_1709
ThiJ/PfpI family protein; COG0693 [R] Putative intracellular protease/amidase.
 
     0.824
LSL_1671
COG0392 [S] Predicted integral membrane protein.
 
  
 0.534
LSL_1710
COG0584 [C] Glycerophosphoryl diester phosphodiesterase.
       0.510
LSL_1704
COG0474 [P] Cation transport ATPase.
  
  
 0.466
LSL_1707
COG1929 [G] Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.461
Your Current Organism:
Lactobacillus salivarius
NCBI taxonomy Id: 362948
Other names: L. salivarius UCC118, Lactobacillus salivarius UCC118, Lactobacillus salivarius str. UCC118, Lactobacillus salivarius strain UCC118, Lactobacillus salivarius subsp. salivarius UCC118
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