STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ_2793ADUF181 family protein. (597 aa)    
Predicted Functional Partners:
HQ_1582A
Nitroreductase family protein.
 
  
 0.911
HQ_1494A
ABC-type transport system permease protein.
 
  
 0.730
HQ_3083A
Abi/CAAX domain protein.
 
  
 0.707
HQ_2792A
Uncharacterized protein.
       0.691
HQ_3078A
Abi/CAAX domain protein.
 
  
 0.657
HQ_1296A
ABC-type transport system permease protein.
 
  
 0.637
HQ_1224A
Uncharacterized protein.
  
  
 0.582
HQ_2097A
Abi/CAAX domain protein.
  
  
 0.582
HQ_3092A
ABC-type transport system permease protein.
  
  
 0.571
HQ_1240A
PHP domain protein.
  
     0.534
Your Current Organism:
Haloquadratum walsbyi DSM 16790
NCBI taxonomy Id: 362976
Other names: H. walsbyi DSM 16790, Haloquadratum walsbyi str. DSM 16790, Haloquadratum walsbyi strain DSM 16790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.