Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HQ_2894A | udp3 | HQ_2894A | HQ_3201A | Putative tRNA-specific adenosine deaminase. | Uridine phosphorylase. | 0.499 |
HQ_3200A | samp1 | HQ_3200A | HQ_3199A | HPP domain protein. | Ubiquitin-like modifier protein SAMP1. | 0.496 |
HQ_3200A | udp3 | HQ_3200A | HQ_3201A | HPP domain protein. | Uridine phosphorylase. | 0.665 |
cdd | surE1 | HQ_2646A | HQ_3350A | Cytidine deaminase. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.906 |
cdd | surE2 | HQ_2646A | HQ_3676A | Cytidine deaminase. | 5'-nucleotidase SurE. | 0.906 |
cdd | tdk | HQ_2646A | HQ_1795A | Cytidine deaminase. | Thymidine kinase. | 0.945 |
cdd | udp2 | HQ_2646A | HQ_2647A | Cytidine deaminase. | Uridine phosphorylase. | 0.980 |
cdd | udp3 | HQ_2646A | HQ_3201A | Cytidine deaminase. | Uridine phosphorylase. | 0.959 |
cdd | upp | HQ_2646A | HQ_1029A | Cytidine deaminase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.660 |
samp1 | HQ_3200A | HQ_3199A | HQ_3200A | Ubiquitin-like modifier protein SAMP1. | HPP domain protein. | 0.496 |
samp1 | udp3 | HQ_3199A | HQ_3201A | Ubiquitin-like modifier protein SAMP1. | Uridine phosphorylase. | 0.457 |
surE1 | cdd | HQ_3350A | HQ_2646A | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Cytidine deaminase. | 0.906 |
surE1 | surE2 | HQ_3350A | HQ_3676A | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 5'-nucleotidase SurE. | 0.908 |
surE1 | tdk | HQ_3350A | HQ_1795A | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Thymidine kinase. | 0.913 |
surE1 | udp2 | HQ_3350A | HQ_2647A | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Uridine phosphorylase. | 0.901 |
surE1 | udp3 | HQ_3350A | HQ_3201A | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Uridine phosphorylase. | 0.901 |
surE1 | upp | HQ_3350A | HQ_1029A | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.920 |
surE2 | cdd | HQ_3676A | HQ_2646A | 5'-nucleotidase SurE. | Cytidine deaminase. | 0.906 |
surE2 | surE1 | HQ_3676A | HQ_3350A | 5'-nucleotidase SurE. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.908 |
surE2 | tdk | HQ_3676A | HQ_1795A | 5'-nucleotidase SurE. | Thymidine kinase. | 0.913 |
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