Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LI0013 | LI1084 | LI0013 | LI1084 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Fe-S oxidoreductase. | 0.800 |
LI0013 | LI1085 | LI0013 | LI1085 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Anaerobic glycerol-3-phosphate dehydrogenase, subunit B. | 0.800 |
LI0013 | glpA | LI0013 | LI1086 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Anaerobic glycerol-3-phosphate dehydrogenase subunit A. | 0.838 |
LI0013 | gpsA | LI0013 | LI0828 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.885 |
LI0013 | plsX | LI0013 | LI0163 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Fatty acid/phospholipid biosynthesis enzyme; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.495 |
LI0013 | plsY | LI0013 | LI0198 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Predicted membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.943 |
LI0197 | LI0199 | LI0197 | LI0199 | Similar to endo-1,4-beta-xylanase. | Exoribonuclease R. | 0.548 |
LI0197 | plsY | LI0197 | LI0198 | Similar to endo-1,4-beta-xylanase. | Predicted membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.499 |
LI0199 | LI0197 | LI0199 | LI0197 | Exoribonuclease R. | Similar to endo-1,4-beta-xylanase. | 0.548 |
LI0199 | plsY | LI0199 | LI0198 | Exoribonuclease R. | Predicted membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.752 |
LI0199 | purH | LI0199 | LI0200 | Exoribonuclease R. | AICAR transformylase/IMP cyclohydrolase PurH. | 0.686 |
LI1084 | LI0013 | LI1084 | LI0013 | Fe-S oxidoreductase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.800 |
LI1084 | LI1085 | LI1084 | LI1085 | Fe-S oxidoreductase. | Anaerobic glycerol-3-phosphate dehydrogenase, subunit B. | 0.997 |
LI1084 | glpA | LI1084 | LI1086 | Fe-S oxidoreductase. | Anaerobic glycerol-3-phosphate dehydrogenase subunit A. | 0.998 |
LI1084 | gpsA | LI1084 | LI0828 | Fe-S oxidoreductase. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.900 |
LI1084 | plsY | LI1084 | LI0198 | Fe-S oxidoreductase. | Predicted membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.900 |
LI1085 | LI0013 | LI1085 | LI0013 | Anaerobic glycerol-3-phosphate dehydrogenase, subunit B. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.800 |
LI1085 | LI1084 | LI1085 | LI1084 | Anaerobic glycerol-3-phosphate dehydrogenase, subunit B. | Fe-S oxidoreductase. | 0.997 |
LI1085 | glpA | LI1085 | LI1086 | Anaerobic glycerol-3-phosphate dehydrogenase, subunit B. | Anaerobic glycerol-3-phosphate dehydrogenase subunit A. | 0.999 |
LI1085 | gpsA | LI1085 | LI0828 | Anaerobic glycerol-3-phosphate dehydrogenase, subunit B. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.900 |
page 1 of 3