Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LI0370 | LI0371 | LI0370 | LI0371 | Hypothetical protein. | Hypothetical protein. | 0.720 |
LI0370 | fbp | LI0370 | LI0369 | Hypothetical protein. | Fructose-1,6-bisphosphatase. | 0.575 |
LI0370 | ygjD | LI0370 | LI0368 | Hypothetical protein. | Metal-dependent proteases with possible chaperone activity; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.477 |
LI0371 | LI0370 | LI0371 | LI0370 | Hypothetical protein. | Hypothetical protein. | 0.720 |
LI0371 | fbp | LI0371 | LI0369 | Hypothetical protein. | Fructose-1,6-bisphosphatase. | 0.521 |
LI0371 | ygjD | LI0371 | LI0368 | Hypothetical protein. | Metal-dependent proteases with possible chaperone activity; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.403 |
fba | fbp | LI0763 | LI0369 | Fructose/tagatose bisphosphate aldolase. | Fructose-1,6-bisphosphatase. | 0.948 |
fba | glpX | LI0763 | LI0228 | Fructose/tagatose bisphosphate aldolase. | Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins. | 0.942 |
fba | pfp | LI0763 | LI0052 | Fructose/tagatose bisphosphate aldolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.949 |
fba | pgi | LI0763 | LI0879 | Fructose/tagatose bisphosphate aldolase. | Glucose-6-phosphate isomerase. | 0.972 |
fba | porA | LI0763 | LI0278 | Fructose/tagatose bisphosphate aldolase. | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | 0.915 |
fba | tkt | LI0763 | LI0219 | Fructose/tagatose bisphosphate aldolase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.964 |
fba | xanB | LI0763 | LI0984 | Fructose/tagatose bisphosphate aldolase. | Phosphomannose isomerase/GDP-mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.438 |
fbp | LI0370 | LI0369 | LI0370 | Fructose-1,6-bisphosphatase. | Hypothetical protein. | 0.575 |
fbp | LI0371 | LI0369 | LI0371 | Fructose-1,6-bisphosphatase. | Hypothetical protein. | 0.521 |
fbp | fba | LI0369 | LI0763 | Fructose-1,6-bisphosphatase. | Fructose/tagatose bisphosphate aldolase. | 0.948 |
fbp | glpX | LI0369 | LI0228 | Fructose-1,6-bisphosphatase. | Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins. | 0.912 |
fbp | pfp | LI0369 | LI0052 | Fructose-1,6-bisphosphatase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.939 |
fbp | pgi | LI0369 | LI0879 | Fructose-1,6-bisphosphatase. | Glucose-6-phosphate isomerase. | 0.935 |
fbp | porA | LI0369 | LI0278 | Fructose-1,6-bisphosphatase. | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | 0.552 |
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