STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LI0604PleD. (360 aa)    
Predicted Functional Partners:
LI0603
Two-component response regulator.
 
  
 0.711
LI1094
HD-GYP domain.
 
 
 0.708
flgF
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.582
rsbW
Sigma regulatory factor-histidine kinase.
   
 
 0.503
leuS
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.482
flgI
Flagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.479
fliP
Flagellar biosynthesis pathway, component FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.473
flgG
Flagellar basal body L-ring protein.
   
   0.456
fliC
Flagellin and related hook-associated proteins; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
   0.446
fliC-2
Flagellin and related hook-associated proteins; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
   0.446
Your Current Organism:
Lawsonia intracellularis
NCBI taxonomy Id: 363253
Other names: L. intracellularis PHE/MN1-00, Lawsonia intracellularis PHE/MN1-00, Lawsonia intracellularis str. PHE/MN1-00, Lawsonia intracellularis strain PHE/MN1-00
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