STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kefCKef-type K+ transport systems, membrane components; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (658 aa)    
Predicted Functional Partners:
trkA
K+ transport systems, NAD-binding component.
  
  
 0.812
trkH
Trk-type K+ transport systems, membrane components; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
     
 0.613
LI0552
Signal transduction histidine kinase.
  
   
 0.491
LI0262
Amino acid transporters.
     
 0.469
LI0263
Putative amino acid-amine transport protein.
     
 0.469
flgF
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.448
LI0601
Voltage-gated chloride channel family protein.
     
 0.434
rfbB
dTDP-D-glucose 4,6-dehydratase.
      
 0.410
dppF
Oligopeptide ABC transporter (ATP-binding protein); Belongs to the ABC transporter superfamily.
      
 0.410
lysC
Aspartokinases; Belongs to the aspartokinase family.
     
 0.406
Your Current Organism:
Lawsonia intracellularis
NCBI taxonomy Id: 363253
Other names: L. intracellularis PHE/MN1-00, Lawsonia intracellularis PHE/MN1-00, Lawsonia intracellularis str. PHE/MN1-00, Lawsonia intracellularis strain PHE/MN1-00
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