Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HydH | atoC | LI1078 | LI0877 | Signal transduction histidine kinase. | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.722 |
| HydH | rpoN | LI1078 | LI0457 | Signal transduction histidine kinase. | DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.448 |
| LI0876 | atoC | LI0876 | LI0877 | tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.639 |
| LI0876 | atoS | LI0876 | LI0878 | tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Signal transduction histidine kinase. | 0.565 |
| LI0876 | pgi | LI0876 | LI0879 | tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Glucose-6-phosphate isomerase. | 0.558 |
| LI0876 | rpoN | LI0876 | LI0457 | tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.516 |
| atoC | HydH | LI0877 | LI1078 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Signal transduction histidine kinase. | 0.722 |
| atoC | LI0876 | LI0877 | LI0876 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.639 |
| atoC | atoS | LI0877 | LI0878 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Signal transduction histidine kinase. | 0.792 |
| atoC | fleN | LI0877 | LI0528 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | DNA-directed RNA polymerase specialized sigma subunit. | 0.525 |
| atoC | flhA | LI0877 | LI0530 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Flagellar biosynthesis pathway, component FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.502 |
| atoC | flhF | LI0877 | LI0529 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Flagellar GTP-binding protein. | 0.505 |
| atoC | fliM | LI0877 | LI0027 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Flagellar motor switch protein. | 0.498 |
| atoC | pgi | LI0877 | LI0879 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Glucose-6-phosphate isomerase. | 0.619 |
| atoC | porA | LI0877 | LI0278 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit. | 0.528 |
| atoC | rpoN | LI0877 | LI0457 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.690 |
| atoS | LI0876 | LI0878 | LI0876 | Signal transduction histidine kinase. | tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.565 |
| atoS | atoC | LI0878 | LI0877 | Signal transduction histidine kinase. | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.792 |
| atoS | pgi | LI0878 | LI0879 | Signal transduction histidine kinase. | Glucose-6-phosphate isomerase. | 0.784 |
| fleN | atoC | LI0528 | LI0877 | DNA-directed RNA polymerase specialized sigma subunit. | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.525 |
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