STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF3D7_0208200KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (300 aa)    
Predicted Functional Partners:
PF3D7_1224400
WD repeat-containing protein, putative.
   
 0.999
PF3D7_1461200
U3 small nucleolar ribonucleoprotein protein IMP3, putative.
   
 0.998
PF3D7_0106700
Small ribosomal subunit assembling AARP2 protein.
   
 
 0.998
PFL2295w
Probable U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.998
PF3D7_1226700
U3 small nucleolar RNA-interacting protein 2, putative.
   
 0.998
PF3D7_1208100
Uncharacterized protein.
   
 0.998
PF3D7_0801500
Nucleolar protein 10, putative.
   
 0.998
PF3D7_0722600
U3 small nucleolar RNA-associated protein 7, putative.
   
 0.998
PF3D7_1333600
U3 small nucleolar RNA-associated protein 4, putative.
   
 0.998
PF3D7_1307100
U3 small nucleolar RNA-associated protein 6, putative.
   
 0.998
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 36329
Other names: P. falciparum 3D7, Plasmodium falciparum (isolate 3D7), Plasmodium falciparum 3D7
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