STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF3D7_1031500DEAD/DEAH box helicase, putative. (917 aa)    
Predicted Functional Partners:
PF3D7_1003800
U5 small nuclear ribonucleoprotein component, putative.
   
 
 0.741
PF3D7_1110200
Pre-mRNA-processing factor 6, putative.
   
 
 0.723
PF3D7_1033600
Pre-mRNA-splicing factor CEF1, putative.
    
 
 0.714
PF3D7_1235700
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.705
PF3D7_1311300
ATP synthase subunit gamma.
   
 
 0.695
PF3D7_1310000
ATP synthase subunit O, mitochondrial, putative.
  
 
 0.688
PF3D7_0217100
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.682
PF3D7_1147700
ATP synthase subunit delta, mitochondrial, putative.
   
 
 0.631
PF3D7_1468700
Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family.
  
 
0.589
PF3D7_0715500
ATP synthase subunit epsilon, mitochondrial, putative.
   
 
 0.578
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 36329
Other names: P. falciparum 3D7, Plasmodium falciparum (isolate 3D7), Plasmodium falciparum 3D7
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