STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF3D7_146670060S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (179 aa)    
Predicted Functional Partners:
PF3D7_0729400
Ribosome biogenesis protein BRX1, putative.
   
 
 0.996
PF3D7_1367600
Ribosome biogenesis protein MRT4, putative.
   
 0.995
PF3D7_1028300
rRNA-processing protein EBP2, putative.
   
 0.994
PF3D7_0630500
Ribosome biogenesis protein YTM1, putative.
   
 
 0.993
PF3D7_0707900
Ribosomal protein S8e, putative.
   
 0.993
PF3D7_0921800
Ribosome production factor 1, putative.
   
 0.992
PF11_0090
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.992
PF3D7_1340300
Nucleolar complex protein 2, putative.
   
 0.991
PF3D7_1405800
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.990
PF3D7_0506100
60S ribosomal subunit protein L24, putative.
   
 
 0.984
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 36329
Other names: P. falciparum 3D7, Plasmodium falciparum (isolate 3D7), Plasmodium falciparum 3D7
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.