Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KIC63180.1Ferrichrome-iron receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (761 aa)    
Predicted Functional Partners:
KIC64834.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.593
KIC64572.1
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.580
KIC63179.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.567
KIC64575.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
KIC62463.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
KIC61748.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
KIC61764.1
Ferric siderophore ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
KIC61486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
KIC63614.1
Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.523
KIC61766.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.523
Your Current Organism:
Chryseobacterium taiwanense
NCBI taxonomy Id: 363331
Other names: BCRC 17412, C. taiwanense, Chryseobacterium taiwanense Tai et al. 2006 emend. Montero-Calasanz et al. 2014, Chryseobacterium taiwanense Tai et al. 2006 emend. Wu et al. 2013, IAM 15317, JCM 21767, LMG 23355, LMG:23355, strain Soil-3-27
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