STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107886740Uncharacterized protein LOC107886740. (86 aa)    
Predicted Functional Partners:
LOC107935819
Uncharacterized protein LOC107935819.
  
     0.541
LOC107948363
Uncharacterized protein LOC107948363.
  
     0.541
LOC107904010
Putative disease resistance protein At3g14460.
  
     0.539
LOC107896768
Uncharacterized protein LOC107896768.
  
     0.538
LOC107914590
Uncharacterized protein LOC107914590.
  
     0.538
LOC107909271
Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1.
  
     0.536
LOC107934926
Uncharacterized protein LOC107934926 isoform X1.
  
     0.534
LOC107941048
Putative methylesterase 6.
  
     0.534
LOC107886795
Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like.
  
     0.533
LOC107909538
Major pollen allergen Ole e 1-like.
  
     0.533
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.