STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107886762Trafficking protein particle complex II-specific subunit 130 homolog isoform X1. (1266 aa)    
Predicted Functional Partners:
LOC107904585
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.991
LOC107908647
Trafficking protein particle complex subunit 2-like protein.
    
 0.985
LOC107927827
Trafficking protein particle complex subunit 2-like protein.
    
 0.985
LOC107890090
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.984
LOC107891361
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.984
LOC107953757
Trafficking protein particle complex II-specific subunit 120 homolog.
  
 0.983
LOC107962914
Trafficking protein particle complex II-specific subunit 120 homolog isoform X1.
  
 0.983
LOC107895008
Trafficking protein particle complex subunit 6B-like isoform X1.
    
 0.978
LOC107895025
Trafficking protein particle complex subunit 6B-like.
    
 0.978
LOC107961859
Trafficking protein particle complex subunit 6B-like.
    
 0.978
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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