STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107887423Uncharacterized protein LOC107887423 isoform X1. (444 aa)    
Predicted Functional Partners:
LOC107919114
Transcription factor MYB39-like.
  
     0.452
LOC107899738
Uncharacterized protein LOC107899738 isoform X1.
      
 0.440
LOC107943039
Uncharacterized protein LOC107943039 isoform X1.
      
 0.440
LOC107912067
Transcription factor bHLH137-like.
      
 0.426
LOC107923621
Transcription factor bHLH137-like.
      
 0.426
LOC107946607
Transcription factor bHLH137-like.
      
 0.426
LOC107946880
Transcription factor bHLH137-like.
      
 0.426
LOC107909196
Transcription factor HY5.
    
 
 0.425
LOC107895089
Suppressor of mec-8 and unc-52 protein homolog 1 isoform X1.
      
 0.418
LOC107920255
Suppressor of mec-8 and unc-52 protein homolog 1-like.
      
 0.418
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.