STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107887725Uncharacterized protein LOC107887725. (214 aa)    
Predicted Functional Partners:
LOC107910053
Uncharacterized protein LOC107910053.
  
     0.514
LOC107937325
VHS domain-containing protein At3g16270-like.
  
     0.514
LOC107889600
Uncharacterized protein LOC107889600 isoform X1.
  
     0.509
LOC107957779
LOW QUALITY PROTEIN: VQ motif-containing protein 9.
  
     0.507
LOC107921452
BRI1 kinase inhibitor 1-like.
  
     0.504
LOC107891133
Uncharacterized protein LOC107891133 isoform X1.
  
     0.503
LOC107905278
Uncharacterized protein LOC107905278 isoform X1.
  
     0.502
LOC107896853
Uncharacterized protein LOC107896853.
  
     0.500
LOC107914500
Uncharacterized protein LOC107914500.
  
     0.500
LOC107917087
BRI1 kinase inhibitor 1-like.
  
     0.500
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.