STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107888913Uncharacterized protein LOC107888913. (194 aa)    
Predicted Functional Partners:
LOC107926973
Copper chaperone for superoxide dismutase, chloroplastic/cytosolic-like.
   
 0.949
LOC107930044
Copper chaperone for superoxide dismutase, chloroplastic/cytosolic-like.
   
 0.949
LOC107894275
Protein DJ-1 homolog C-like isoform X1.
  
 0.762
LOC107899375
Protein DJ-1 homolog D-like.
  
 0.762
LOC107903724
Protein DJ-1 homolog B-like.
  
 0.762
LOC107917733
Protein DJ-1 homolog B-like.
  
 0.762
LOC107917735
Protein DJ-1 homolog B-like.
  
 0.762
LOC107924031
DJ-1 protein homolog E-like.
  
 0.762
LOC107948788
Protein DJ-1 homolog B-like.
  
 0.762
LOC107953939
Protein DJ-1 homolog D-like.
  
 0.762
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.