STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107889748Uncharacterized protein LOC107889748. (225 aa)    
Predicted Functional Partners:
LOC107894214
Transcription factor PIF1-like isoform X1.
  
   
 0.488
LOC107914853
Myosin-binding protein 2-like.
  
  
  0.470
LOC107941020
Uncharacterized protein At1g51745-like.
  
     0.456
LOC107906122
Uncharacterized protein At1g51745-like.
  
     0.453
LOC107915673
Uncharacterized protein At1g51745-like.
  
     0.448
LOC107886433
Myosin-binding protein 2-like.
  
  
  0.438
LOC107889098
Uncharacterized protein At1g51745-like.
  
     0.437
LOC107909892
Myosin-binding protein 2-like.
  
  
  0.433
LOC107891719
Uncharacterized protein At1g51745-like isoform X1.
  
     0.431
LOC107899273
Uncharacterized protein LOC107899273.
  
     0.426
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.