STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107889843GDSL esterase/lipase 7-like. (266 aa)    
Predicted Functional Partners:
LOC107892183
Germin-like protein subfamily 1 member 20.
  
     0.490
LOC107956182
Peroxidase 34-like.
  
 
  0.488
LOC107894409
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.479
LOC107922547
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.478
LOC107889773
Transcription factor BEE 2-like isoform X1.
  
     0.475
LOC107949942
Cellulose synthase A catalytic subunit 2 [UDP-forming]-like.
  
 
  0.472
LOC107959439
Transcription factor HBI1-like.
  
     0.469
LOC107910975
Cellulose synthase A catalytic subunit 2 [UDP-forming]-like.
  
 
  0.467
LOC107945298
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.465
LOC107926822
Transcription factor BEE 2-like isoform X1.
  
     0.462
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.