STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107890472Putative cysteine-rich receptor-like protein kinase 20; Belongs to the glycosyl hydrolase 18 family. (775 aa)    
Predicted Functional Partners:
LOC107893138
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.772
LOC107897209
Cytochrome c oxidase subunit 5b-1, mitochondrial-like.
   
 0.539
LOC107902063
Cytochrome c oxidase subunit 5b-1, mitochondrial-like.
   
 0.539
LOC107913912
Cytochrome c oxidase subunit 5b-2, mitochondrial-like.
   
 0.539
LOC107937383
Cytochrome c oxidase subunit 5b-1, mitochondrial.
   
 0.539
LOC107962957
Cytochrome c oxidase subunit 5b-2, mitochondrial-like.
   
 0.539
LOC107902077
Cytochrome c oxidase subunit 6a, mitochondrial-like.
   
 0.500
LOC107913356
Cytochrome c oxidase subunit 6a, mitochondrial-like.
   
 0.500
LOC107935276
Cytochrome c oxidase subunit 6a, mitochondrial-like; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.500
LOC107950514
Cytochrome c oxidase subunit 6a, mitochondrial-like; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.500
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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